I had some issues early on with mold. It turned out to be the caps I was using. We switched from black caps to gold caps on our bottles and never had a problem again. I was told that once you tighten a cap you should not try to tighten it more minutes later. That could brake the seal. We fill the bottles almost to the top and that has worked well for us. I have never turned bottles on their side like others had. The only issue I'm having now is spinning thousands of caps on every month. We are still looking into a capper machine and hope to get one very soon. Also wondering how long was it before you saw mold in your bottles?
Spud